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1.
Diagn Microbiol Infect Dis ; 97(4): 115055, 2020 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-32470844

RESUMO

The objectives of this study were to assess the ideal volume of Copan FecalSwab™ (FS) preserved stool sample to use with the BD MAX™ Enteric Bacterial Panel and the Extended Enteric Bacterial Panel (BDM GIP) and to compare the performance of FS to the recommended Meridian Para-Pak Cary-Blair medium (PP) for the BDM GIP. Three different input volumes (10, 25, and 50 µL) of stool inoculated with American Type Culture Collection strains representing the targets detected by BDM GIP were tested. Additionally, 144 unpreserved stool samples submitted for gastrointestinal (GI) testing were transferred to PP and FS media and tested by the BDM GIP using 10 µL of PP and 50 µL of FS media. A 100% agreement was observed between PP and FS results. The performance of 50 µL of FS stool preserved sample was equivalent to 10 µL of traditional Cary-Blair PP preserved specimens for GI pathogens detection using the BDM GIP.


Assuntos
Fezes/microbiologia , Microbioma Gastrointestinal , Técnicas Microbiológicas/métodos , Manejo de Espécimes/métodos , Bactérias/classificação , Bactérias/genética , Bactérias/isolamento & purificação , Meios de Cultura , Gastroenterite/diagnóstico , Gastroenterite/microbiologia , Microbioma Gastrointestinal/genética , Humanos , Técnicas de Diagnóstico Molecular , Sensibilidade e Especificidade
2.
Pract Lab Med ; 12: e00102, 2018 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-30009245

RESUMO

The aim of this study was to develop a multiplex PCR test to detect Achromobacter xylosoxidans (AX), Burkholderia cepacia (BC), Pseudomonas aeruginosa (PSA) and Stenotrophomonas maltophilia (SM) directly from CF patient's respiratory samples using the open mode of the BD MAX™ System. A total of 402 CF respiratory samples were evaluated by culture and PCR. Specific sets of primers and probes for each target were designed in-house. Out of 402 samples tested, 196 were identified as negative and 206 as positive by culture for AX, PSA, BC and SM. Among culture positive samples, PCR detected 21/27 AX, 4/5 BC, 138/140 PSA and 29/34 SM. In addition, PCR assay identified 35 samples as positive that were initially negative by culture for those 4 targets. The CF BDM test proved to be an excellent tool to detect AX, BC, PSA and SM by real-time PCR on an automated platform.

5.
J Mol Diagn ; 19(2): 295-302, 2017 03.
Artigo em Inglês | MEDLINE | ID: mdl-28190461

RESUMO

A new multiplex PCR test was designed to detect Mycobacterium chelonae, Mycobacterium abscessus group, and Mycobacterium fortuitum complex on the BD MAX System. A total of 197 clinical samples previously submitted for mycobacterial culture were tested using the new protocol. Samples were first treated with proteinase K, and then each sample was inoculated into the BD MAX Sample Buffer Tube. Extraction and multiplex PCR were performed by the BD MAX System, using the BD MAX ExK TNA-3 extraction kit and BD TNA Master Mix, along with specific in-house designed primers and probes for each target. The limit of detection of each target, as well as specificity, was evaluated. Of 197 clinical samples included in this study, 133 were positive and 60 were negative for mycobacteria by culture, and another 4 negative samples were spiked with M. chelonae ATCC 35752. The new multiplex PCR on the BD MAX had 97% concordant results with culture for M. abscessus group detection, 99% for M. chelonae, and 100% for M. fortuitum complex. The new multiplex PCR test performed on the BD MAX System proved to be a sensitive and specific test to detect M. chelonae, M. abscessus group, and M. fortuitum complex by real-time PCR on an automated sample-in results-out platform.


Assuntos
Reação em Cadeia da Polimerase Multiplex , Infecções por Mycobacterium/diagnóstico , Infecções por Mycobacterium/microbiologia , Mycobacterium chelonae/genética , Mycobacterium fortuitum/genética , Mycobacterium/genética , Reação em Cadeia da Polimerase em Tempo Real , Humanos , Reação em Cadeia da Polimerase Multiplex/instrumentação , Reação em Cadeia da Polimerase Multiplex/métodos , Reação em Cadeia da Polimerase em Tempo Real/instrumentação , Reação em Cadeia da Polimerase em Tempo Real/métodos , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
6.
J Clin Microbiol ; 54(6): 1660-1663, 2016 06.
Artigo em Inglês | MEDLINE | ID: mdl-27053670

RESUMO

Group B Streptococcus detection directly from Copan ESwab collected samples, using the BD Max GBS assay, was evaluated on receipt in the laboratory and after 24 h at room temperature. Results were compared to those using Lim broth enrichment PCR and culture. No significant difference was observed between 24 h ESwab and Lim broth PCRs.


Assuntos
Técnicas Bacteriológicas/métodos , Técnicas de Diagnóstico Molecular/métodos , Manejo de Espécimes/métodos , Streptococcus agalactiae/isolamento & purificação , Feminino , Humanos , Recém-Nascido , Reação em Cadeia da Polimerase/métodos , Gravidez , Sensibilidade e Especificidade
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